SRX030964
GSM621134: ECR-WPP+90 GFP ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GFP

Cell type

Cell type Class
Pupae
Cell type
White prepupae
NA
NA

Attributes by original data submitter

Sample

source_name
ECR-WPP+90
developmental stage
ECR-WPP+90
antibody name
GFP
manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM621134: ECR-WPP+90_GFP_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
46056802
Reads aligned (%)
70.8
Duplicates removed (%)
67.7
Number of peaks
6473 (qval < 1E-05)

dm3

Number of total reads
46056802
Reads aligned (%)
71.0
Duplicates removed (%)
66.7
Number of peaks
6457 (qval < 1E-05)

Base call quality data from DBCLS SRA