ChIP-Atlas: SRX030149

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Embryo
Cell type: 0-8h embryos
NA: NA

Attributes by original data submitter

Sample

source_name: E0-8h
developmental stage: E0-8h

Sequenced DNA Library

library_name: GSM614653: Trl_E0-8h_INPUT_1
library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads: 6829066
Reads aligned (%): 91.3
Duplicates removed (%): 11.3
Number of peaks: 809 (qval < 1E-05)

dm3

Number of total reads: 6829066
Reads aligned (%): 91.7
Duplicates removed (%): 9.2
Number of peaks: 427 (qval < 1E-05)

Base call quality data from DBCLS SRA