Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Trl

Cell type

Cell type Class
Embryo
Cell type
0-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-8h
developmental stage
E0-8h
antibody name
Trl
manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM614652: Trl_E0-8h_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
50496541
Reads aligned (%)
76.6
Duplicates removed (%)
80.7
Number of peaks
11080 (qval < 1E-05)

dm6

Number of total reads
50496541
Reads aligned (%)
75.8
Duplicates removed (%)
85.3
Number of peaks
6518 (qval < 1E-05)

Base call quality data from DBCLS SRA