Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Pax7

Cell type

Cell type Class
Muscle
Cell type
Myoblasts
MeSH Description
Embryonic (precursor) cells of the myogenic lineage that develop from the MESODERM. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes (MYOCYTES, SKELETAL; MYOCYTES, CARDIAC; MYOCYTES, SMOOTH MUSCLE).

Attributes by original data submitter

Sample

source_name
myoblasts with TAP tagged Pax7
strain
BALB/c
tissue of origin
skeletal muscle
cell type
primary myoblasts

Sequenced DNA Library

library_name
GSM615619: TAP-Tagged Pax7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
17344164
Reads aligned (%)
78.6
Duplicates removed (%)
18.5
Number of peaks
22632 (qval < 1E-05)

mm9

Number of total reads
17344164
Reads aligned (%)
78.3
Duplicates removed (%)
18.6
Number of peaks
22692 (qval < 1E-05)

Base call quality data from DBCLS SRA