SRX029597
GSM614003: Jurkat

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TAL1

Cell type

Cell type Class
Blood
Cell type
T-ALL
NA
NA

Attributes by original data submitter

Sample

source_name
Leukemic T-cell line originally derived from a T-ALL patient
cell type
Leukemic T-cell
chip antibody
anti-TAL1 Ab (Santa Cruz sc-12984)

Sequenced DNA Library

library_name
GSM614003: Jurkat
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11736508
Reads aligned (%)
66.0
Duplicates removed (%)
4.3
Number of peaks
1639 (qval < 1E-05)

hg19

Number of total reads
11736508
Reads aligned (%)
65.4
Duplicates removed (%)
5.5
Number of peaks
1742 (qval < 1E-05)

Base call quality data from DBCLS SRA