SRX029436
GSM607952: MK FLI1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FLI1

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Megakaryocytes
cell type
megakaryocytes cultured from cord blood CD34-positive cells
chip antibody
FLI1

Sequenced DNA Library

library_name
GSM607952: MK_FLI1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
15578369
Reads aligned (%)
87.9
Duplicates removed (%)
5.4
Number of peaks
3235 (qval < 1E-05)

hg38

Number of total reads
15578369
Reads aligned (%)
89.4
Duplicates removed (%)
4.4
Number of peaks
3258 (qval < 1E-05)

Base call quality data from DBCLS SRA