Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Megakaryocytes
cell type
megakaryocytes cultured from cord blood CD34-positive cells
chip antibody
RUNX1

Sequenced DNA Library

library_name
GSM607951: MK_RUNX1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
17845781
Reads aligned (%)
65.9
Duplicates removed (%)
28.8
Number of peaks
9068 (qval < 1E-05)

hg38

Number of total reads
17845781
Reads aligned (%)
67.0
Duplicates removed (%)
28.0
Number of peaks
8989 (qval < 1E-05)

Base call quality data from DBCLS SRA