SRX029434
GSM607950: MK GATA2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GATA2

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Megakaryocytes
cell type
megakaryocytes cultured from cord blood CD34-positive cells
chip antibody
GATA2

Sequenced DNA Library

library_name
GSM607950: MK_GATA2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13260247
Reads aligned (%)
81.8
Duplicates removed (%)
5.1
Number of peaks
753 (qval < 1E-05)

hg19

Number of total reads
13260247
Reads aligned (%)
81.3
Duplicates removed (%)
5.9
Number of peaks
896 (qval < 1E-05)

Base call quality data from DBCLS SRA