SRX029149
GSM611282: EV-10h

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
Myocytes
NA
NA

Attributes by original data submitter

Sample

source_name
myocytes with empty vector, 10h in differentiating medium
strain
BALB/c
genotype/variation
wild type
tissue of origin
skeletal muscle
cell type
myocytes
transcription factor
control (empty vector)
growth protocol
10h in differentiating medium
sample type
control

Sequenced DNA Library

library_name
GSM611282: EV-10h
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
19259167
Reads aligned (%)
93.1
Duplicates removed (%)
34.8
Number of peaks
4021 (qval < 1E-05)

mm9

Number of total reads
19259167
Reads aligned (%)
93.0
Duplicates removed (%)
34.9
Number of peaks
4012 (qval < 1E-05)

Base call quality data from DBCLS SRA