Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 Cells, 24 hours following induction with TPA
cell line
K562
treatment group
24 hours following induction with TPA
chip antibody
H3K27me3

Sequenced DNA Library

library_name
GSM610338: K562-TPA-H3K27ME3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
21652941
Reads aligned (%)
84.3
Duplicates removed (%)
26.4
Number of peaks
94 (qval < 1E-05)

hg19

Number of total reads
21652941
Reads aligned (%)
84.0
Duplicates removed (%)
27.0
Number of peaks
133 (qval < 1E-05)

Base call quality data from DBCLS SRA