Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 Cells, 24 hours following induction with TPA
cell line
K562
treatment group
24 hours following induction with TPA
chip antibody
none

Sequenced DNA Library

library_name
GSM610333: K562-TPA-NIS
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
17492192
Reads aligned (%)
62.2
Duplicates removed (%)
6.7
Number of peaks
851 (qval < 1E-05)

hg19

Number of total reads
17492192
Reads aligned (%)
61.4
Duplicates removed (%)
8.1
Number of peaks
971 (qval < 1E-05)

Base call quality data from DBCLS SRA