Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 Cells
cell line
K562
treatment group
untreated
chip antibody
RUNX1

Sequenced DNA Library

library_name
GSM610332: K562-RUNX1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
17907578
Reads aligned (%)
54.8
Duplicates removed (%)
21.8
Number of peaks
2441 (qval < 1E-05)

hg38

Number of total reads
17907578
Reads aligned (%)
56.3
Duplicates removed (%)
20.4
Number of peaks
2318 (qval < 1E-05)

Base call quality data from DBCLS SRA