Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
chronic myeloid leukemia cell line
cell line
K562
harvest date
2008-06-12
chip antibody
CST monoclonal rabbit rabbit anti-H3K27me3

Sequenced DNA Library

library_name
GSM608166: H3K27me3_K562_ChIP-seq_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
25940884
Reads aligned (%)
75.2
Duplicates removed (%)
5.8
Number of peaks
1896 (qval < 1E-05)

hg19

Number of total reads
25940884
Reads aligned (%)
75.0
Duplicates removed (%)
6.0
Number of peaks
1891 (qval < 1E-05)

Base call quality data from DBCLS SRA