Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ELK1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
cervical carcinoma
cell line
HeLa-S3
harvest date
06/19/09
chip antibody
Epitomics monoclonal rabbit anti ELK1

Sequenced DNA Library

library_name
GSM608163: ELK1_HeLa_ChIP-seq_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
43404698
Reads aligned (%)
48.1
Duplicates removed (%)
9.7
Number of peaks
1882 (qval < 1E-05)

hg38

Number of total reads
43404698
Reads aligned (%)
48.9
Duplicates removed (%)
8.9
Number of peaks
1772 (qval < 1E-05)

Base call quality data from DBCLS SRA