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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: ELK1
wikigenes
PDBj
CellType: HeLa
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX028646
GSM608163: ELK1 HeLa ChIP-seq rep1
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
ELK1
Cell type
Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma
Attributes by original data submitter
Sample
source_name
cervical carcinoma
cell line
HeLa-S3
harvest date
06/19/09
chip antibody
Epitomics monoclonal rabbit anti ELK1
Sequenced DNA Library
library_name
GSM608163: ELK1_HeLa_ChIP-seq_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
43404698
Reads aligned (%)
53.2
Duplicates removed (%)
9.7
Number of peaks
1882 (qval < 1E-05)
hg38
Number of total reads
43404698
Reads aligned (%)
53.6
Duplicates removed (%)
8.9
Number of peaks
1772 (qval < 1E-05)
Base call quality data from
DBCLS SRA