Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells
strain
C57BL/6
cell type
CD4+ T cells stimulated by IL-6 and IL23
chip antibody
H3K4me3 (ab8580, Abcam, MA)

Sequenced DNA Library

library_name
GSM580758: H3K4me3_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
9466495
Reads aligned (%)
57.5
Duplicates removed (%)
28.8
Number of peaks
26337 (qval < 1E-05)

mm9

Number of total reads
9466495
Reads aligned (%)
57.3
Duplicates removed (%)
28.8
Number of peaks
26341 (qval < 1E-05)

Base call quality data from DBCLS SRA