Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZNF274

Cell type

Cell type Class
Blood
Cell type
GM12878
Tissue
blood
Lineage
mesoderm
Description
B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Attributes by original data submitter

Sample

source_name
lymphoblast cells
cell line
GM12878
harvest date
2010-01-13
chip antibody
abnova mouse polyclonal anti-ZNF274
vendor
Abnova

Sequenced DNA Library

library_name
GSM607487: ZNF274_GM12878_ChIP-seq_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
15420872
Reads aligned (%)
62.1
Duplicates removed (%)
1.5
Number of peaks
578 (qval < 1E-05)

hg38

Number of total reads
15420872
Reads aligned (%)
63.1
Duplicates removed (%)
0.8
Number of peaks
411 (qval < 1E-05)

Base call quality data from DBCLS SRA