Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZNF274

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
cervical carcinoma
cell line
HelaS3
harvest date
2010-05-05
chip antibody
abnova mouse polyclonal anti-ZNF274
vendor
Abnova

Sequenced DNA Library

library_name
GSM607486: ZNF274_HelaS3_ChIP-seq_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
38896954
Reads aligned (%)
75.3
Duplicates removed (%)
4.0
Number of peaks
1104 (qval < 1E-05)

hg38

Number of total reads
38896954
Reads aligned (%)
76.4
Duplicates removed (%)
3.2
Number of peaks
889 (qval < 1E-05)

Base call quality data from DBCLS SRA