SRX027829
GSM604729: S2-DRSC-ChIP-Trx-C replicate 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
trx

Cell type

Cell type Class
Cell line
Cell type
S2-DRSC
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
DRSC-S2 cell line
cell line
DRSC-S2
chip antibody
Trx-C

Sequenced DNA Library

library_name
GSM604729: S2-DRSC-ChIP-Trx-C replicate 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
9934273
Reads aligned (%)
58.9
Duplicates removed (%)
18.0
Number of peaks
6632 (qval < 1E-05)

dm6

Number of total reads
9934273
Reads aligned (%)
58.5
Duplicates removed (%)
20.3
Number of peaks
5876 (qval < 1E-05)

Base call quality data from DBCLS SRA