SRX027482
GSM602291: ESC p300

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H9
NA
NA

Attributes by original data submitter

Sample

source_name
Human embryonic stem cells
cell line
H9 ESC
chip antibody
p300

Sequenced DNA Library

library_name
GSM602291: ESC_p300
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
17384438
Reads aligned (%)
87.6
Duplicates removed (%)
7.4
Number of peaks
38561 (qval < 1E-05)

hg19

Number of total reads
17384438
Reads aligned (%)
87.3
Duplicates removed (%)
7.6
Number of peaks
39879 (qval < 1E-05)

Base call quality data from DBCLS SRA