SRX027464
GSM602781: WCE in 2nd MEF B2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
iPS cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse Embryonic Fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO)
chip antibody
None
cell type
Secondary

Sequenced DNA Library

library_name
GSM602781: WCE in 2nd MEF B2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
19886393
Reads aligned (%)
78.8
Duplicates removed (%)
9.1
Number of peaks
1089 (qval < 1E-05)

mm9

Number of total reads
19886393
Reads aligned (%)
78.7
Duplicates removed (%)
9.3
Number of peaks
1035 (qval < 1E-05)

Base call quality data from DBCLS SRA