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For hg19
BigWig
Peak-call (q < 1E-05)
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For hg38
BigWig
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Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: SUZ12
wikigenes
PDBj
CellType: hESC BG03
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX027458
GSM602674: Suz12 ChipSeq in human ES cells
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
SUZ12
Cell type
Cell type Class
Pluripotent stem cell
Cell type
hESC BG03
NA
NA
Attributes by original data submitter
Sample
source_name
Embyonic stem cells
chip antibody
Suz12
antibody catalog number
Abcam AB12073
cell type
BGO3 (feeder free)
Sequenced DNA Library
library_name
GSM602674: Suz12 ChipSeq in human ES cells
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
12128853
Reads aligned (%)
73.3
Duplicates removed (%)
2.6
Number of peaks
472 (qval < 1E-05)
hg38
Number of total reads
12128853
Reads aligned (%)
74.1
Duplicates removed (%)
2.0
Number of peaks
313 (qval < 1E-05)
Base call quality data from
DBCLS SRA