Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Gonad

Cell type

Testis

MeSH Description

The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Sample

source_name

adult testis

strain

13R/9R and 9R/13R crosses

genotype/variation

Hop2 -/-

chip antibody

input DNA and IgG

Sequenced DNA Library

library_name

GSM602199: Pool of controls for A,B,C,D,E,F,G,H

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

173953455

Reads aligned (%)

83.2

Duplicates removed (%)

11.9

Number of peaks

1544 (qval < 1E-05)

mm9

Number of total reads

173953455

Reads aligned (%)

83.0

Duplicates removed (%)

11.9

Number of peaks

1731 (qval < 1E-05)