Curated Sample Data


Genome
ce10
Antigen Class
Histone
Antigen
H3K4me3
Cell type Class
Embryo
Cell type
Mixed embryo

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Caenorhabditis elegans_N2_MXemb
strain
N2
Stage
MXemb
chip antibody
WA30534819_H3K4me3
antibody manufacturer
Wako (WA)
input experiment/sample
seq-NA_N2_MXemb_5_EE6 (GSM599723)

Metadata from Sequence Read Archive

Library Description


library_name
GSM599725: seq-WA30534819_H3K4me3_N2_MXemb_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer II

External Database Query

Logs in read processing pipeline


Number of total reads
21006018
Reads aligned (%)
65.3
Duplicates removed (%)
25.2
Number of peaks
5240 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA