SRX027210
GSM599725: seq-WA30534819 H3K4me3 N2 MXemb 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Caenorhabditis elegans_N2_MXemb
strain
N2
Stage
MXemb
chip antibody
WA30534819_H3K4me3
antibody manufacturer
Wako (WA)
input experiment/sample
seq-NA_N2_MXemb_5_EE6 (GSM599723)

Sequenced DNA Library

library_name
GSM599725: seq-WA30534819_H3K4me3_N2_MXemb_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
21006018
Reads aligned (%)
65.4
Duplicates removed (%)
25.2
Number of peaks
5242 (qval < 1E-05)

ce10

Number of total reads
21006018
Reads aligned (%)
65.3
Duplicates removed (%)
25.2
Number of peaks
5240 (qval < 1E-05)

Base call quality data from DBCLS SRA