Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Aicda

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
ActivatedBCell_AID
strain
C57BL/6
cell type
in vitro activated B cells
chip target
AID
chip antibody
Rabbit polyclonal described in Chaudhuri et al., Nature (2003)

Sequenced DNA Library

library_name
GSM594829: ActivatedBCell_AID
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
143995816
Reads aligned (%)
51.5
Duplicates removed (%)
13.8
Number of peaks
1042 (qval < 1E-05)

mm9

Number of total reads
143995816
Reads aligned (%)
51.4
Duplicates removed (%)
13.8
Number of peaks
1207 (qval < 1E-05)

Base call quality data from DBCLS SRA