Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Caenorhabditis elegans_N2_MXemb
strain
N2
Stage
MXemb
chip antibody
NIgG
antibody manufacturer
Abcam

Sequenced DNA Library

library_name
GSM596154: seq-AB46540_NIgG_N2_MXemb_2_A_EE1432
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

ce11

Number of total reads
4371299
Reads aligned (%)
75.8
Duplicates removed (%)
26.7
Number of peaks
2038 (qval < 1E-05)

ce10

Number of total reads
4371299
Reads aligned (%)
75.8
Duplicates removed (%)
26.7
Number of peaks
2036 (qval < 1E-05)

Base call quality data from DBCLS SRA