SRX026867
GSM594225: KW4-CG8478-D1 ChIPSeq 1 and 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CG8478

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E8-16h
developmental stage
E8-16h
antibody name
KW4-CG8478-D1
antibody manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM594225: KW4-CG8478-D1_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
52261518
Reads aligned (%)
98.4
Duplicates removed (%)
60.9
Number of peaks
4734 (qval < 1E-05)

dm6

Number of total reads
52261518
Reads aligned (%)
97.5
Duplicates removed (%)
65.0
Number of peaks
5510 (qval < 1E-05)

Base call quality data from DBCLS SRA