Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Dfd

Cell type

Cell type Class
Embryo
Cell type
0-8h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-8h
developmental stage
E0-8h
antibody name
NW-GFP-Goat[Dfd]
antibody manufacturer
White Lab
catalog
Custom

Sequenced DNA Library

library_name
GSM594216: NW-GFP-Goat[Dfd]_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
43433932
Reads aligned (%)
45.8
Duplicates removed (%)
52.7
Number of peaks
16390 (qval < 1E-05)

dm6

Number of total reads
43433932
Reads aligned (%)
37.8
Duplicates removed (%)
60.1
Number of peaks
3203 (qval < 1E-05)

Base call quality data from DBCLS SRA