Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
DDX5

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa cell culture, p68 ChIP
cell line
HeLa S3
chip antibody
p68
antibody vendor
abcam

Sequenced DNA Library

library_name
GSM593999: p68_genomic_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
44912546
Reads aligned (%)
73.6
Duplicates removed (%)
11.5
Number of peaks
1393 (qval < 1E-05)

hg38

Number of total reads
44912546
Reads aligned (%)
75.1
Duplicates removed (%)
10.3
Number of peaks
1244 (qval < 1E-05)

Base call quality data from DBCLS SRA