SRX026743
GSM593412: Pol2Ser5P ChIPSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
Wing imaginal discs, Pol2Ser5P ChIP
tissue
wing imaginal discs
developmental stage
third instar larvae
chip antibody
Pol2Ser5P
chip antibody vendor
Abcam
chip antibody catalog number
ab5131
chip antibody lot number
794448

Sequenced DNA Library

library_name
GSM593412: Pol2Ser5P_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
8558831
Reads aligned (%)
82.9
Duplicates removed (%)
19.1
Number of peaks
7976 (qval < 1E-05)

dm3

Number of total reads
8558831
Reads aligned (%)
83.0
Duplicates removed (%)
18.2
Number of peaks
7582 (qval < 1E-05)

Base call quality data from DBCLS SRA