SRX026707
GSM586875: Islet3 Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
Pancreatic islets
NA
NA

Attributes by original data submitter

Sample

source_name
Pancreatic islets
tissue
Pancreatic islets
chip antibody
anti-Input
antibody manufacturer
none
sonication cycles
15

Sequenced DNA Library

library_name
GSM586875: Islet3_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
5981172
Reads aligned (%)
90.0
Duplicates removed (%)
1.2
Number of peaks
99 (qval < 1E-05)

hg19

Number of total reads
5981172
Reads aligned (%)
89.2
Duplicates removed (%)
2.3
Number of peaks
497 (qval < 1E-05)

Base call quality data from DBCLS SRA