SRX026703
GSM586871: Islet2 Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
Pancreatic islets
NA
NA

Attributes by original data submitter

Sample

source_name
Pancreatic islets
tissue
Pancreatic islets
chip antibody
anti-Input
antibody manufacturer
none
sonication cycles
15

Sequenced DNA Library

library_name
GSM586871: Islet2_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
49110219
Reads aligned (%)
75.8
Duplicates removed (%)
2.4
Number of peaks
1089 (qval < 1E-05)

hg19

Number of total reads
49110219
Reads aligned (%)
74.9
Duplicates removed (%)
3.4
Number of peaks
1263 (qval < 1E-05)

Base call quality data from DBCLS SRA