Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERG

Cell type

Cell type Class
Blood
Cell type
Hematopoietic cells
NA
NA

Attributes by original data submitter

Sample

source_name
UAE (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
5 hrs zinc
antibody
AE (A706)
antibody vendor
n/a (commercialization pending manuscript publication)
antibody catalog number
n/a (commercialization pending manuscript publication)
antibody lot/batch number
n/a (commercialization pending manuscript publication)

Sequenced DNA Library

library_name
GSM585611: UAE_AE (A706_Diagenode)_5 hrs zinc
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
10632077
Reads aligned (%)
86.9
Duplicates removed (%)
7.1
Number of peaks
8564 (qval < 1E-05)

hg38

Number of total reads
10632077
Reads aligned (%)
88.3
Duplicates removed (%)
6.3
Number of peaks
8507 (qval < 1E-05)

Base call quality data from DBCLS SRA