SRX026649
GSM585600: AML pz229 H3K9K14ac (Diagenode pAb-ACHBHS-044 DA-0010) no

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9K14ac

Cell type

Cell type Class
Blood
Cell type
Acute myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

source_name
AML pz229 (leukemic)
cell type
hematopoietic cell
disease state
leukemic
treatment
no
antibody
H3K9K14ac
antibody vendor
Diagenode
antibody catalog number
pAb-ACHBHS-044
antibody lot/batch number
DA-0010

Sequenced DNA Library

library_name
GSM585600: AML pz229_H3K9K14ac (Diagenode_pAb-ACHBHS-044_DA-0010)_no
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28238975
Reads aligned (%)
85.3
Duplicates removed (%)
64.9
Number of peaks
16969 (qval < 1E-05)

hg19

Number of total reads
28238975
Reads aligned (%)
84.8
Duplicates removed (%)
65.8
Number of peaks
16933 (qval < 1E-05)

Base call quality data from DBCLS SRA