Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ESR1

Cell type

Cell type Class
Uterus
Cell type
ECC-1
Primary Tissue
Uterus
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
ECC1 breast cancer cells
cell line
ECC1 breast cancer cells
fraction
ChIP DNA
antibody manufacturer
Santa Cruz
antibody catalog number
sc-543
antibody
ERα
agent
ETOH (ethanol)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
21134429
Reads aligned (%)
68.1
Duplicates removed (%)
4.6
Number of peaks
911 (qval < 1E-05)

hg19

Number of total reads
21134429
Reads aligned (%)
67.6
Duplicates removed (%)
5.3
Number of peaks
1134 (qval < 1E-05)

Base call quality data from DBCLS SRA