Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
Pol II (rpb3) ChIP-seq
cell line
Schneider Line 2 (S2)
antibody
anti-Rpb3 (subunit of Pol II)

Sequenced DNA Library

library_name
GSM577243: Pol II (rpb3) ChIP-seq 1+2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
27606067
Reads aligned (%)
85.8
Duplicates removed (%)
37.8
Number of peaks
13341 (qval < 1E-05)

dm3

Number of total reads
27606067
Reads aligned (%)
86.0
Duplicates removed (%)
35.2
Number of peaks
12880 (qval < 1E-05)

Base call quality data from DBCLS SRA