Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines

Attributes by original data submitter

Sample

source_name
human fibroblast line GM
biomaterial_provider
GM01660
cell line
human fibroblast line GM
chip antibody
H3K27me3

Sequenced DNA Library

library_name
GSM575294: H3K27me3 human fibroblast GM
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
2790146
Reads aligned (%)
59.3
Duplicates removed (%)
6.7
Number of peaks
4 (qval < 1E-05)

hg19

Number of total reads
2790146
Reads aligned (%)
59.1
Duplicates removed (%)
6.8
Number of peaks
10 (qval < 1E-05)

Base call quality data from DBCLS SRA