Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC WIBR7
NA
NA

Attributes by original data submitter

Sample

source_name
hES line WIBR7
cell line
hES line WIBR7
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM575285: H3K4me3 hES WIBR7
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
4089071
Reads aligned (%)
78.9
Duplicates removed (%)
3.6
Number of peaks
23591 (qval < 1E-05)

hg19

Number of total reads
4089071
Reads aligned (%)
78.7
Duplicates removed (%)
3.7
Number of peaks
23561 (qval < 1E-05)

Base call quality data from DBCLS SRA