Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC WIBR2
NA
NA

Attributes by original data submitter

Sample

source_name
hES line WIBR2
cell line
hES line WIBR2
chip antibody
H3K4me3

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
12793879
Reads aligned (%)
67.4
Duplicates removed (%)
5.6
Number of peaks
29915 (qval < 1E-05)

hg19

Number of total reads
12793879
Reads aligned (%)
67.2
Duplicates removed (%)
5.9
Number of peaks
29831 (qval < 1E-05)

Base call quality data from DBCLS SRA