Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC WIBR1
NA
NA

Attributes by original data submitter

Sample

source_name
hES line WIBR1
cell line
hES line WIBR1
chip antibody
H3K4me3

Sequenced DNA Library

library_name
GSM575282: H3K4me3 hES WIBR1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
6496882
Reads aligned (%)
47.9
Duplicates removed (%)
3.5
Number of peaks
14900 (qval < 1E-05)

hg19

Number of total reads
6496882
Reads aligned (%)
47.7
Duplicates removed (%)
3.6
Number of peaks
14868 (qval < 1E-05)

Base call quality data from DBCLS SRA