Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Cell line
Cell type
Kc
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
Kc
developmental stage
Kc
fraction
ChIP
antibody name
H3K4me3-LP
manufacturer
Lake PlacidBIO

Sequenced DNA Library

library_name
GSM570051: K4me3_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm6

Number of total reads
7457474
Reads aligned (%)
92.5
Duplicates removed (%)
36.8
Number of peaks
8006 (qval < 1E-05)

dm3

Number of total reads
7457474
Reads aligned (%)
92.8
Duplicates removed (%)
35.4
Number of peaks
8396 (qval < 1E-05)

Base call quality data from DBCLS SRA