Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Sin3A

Cell type

Cell type Class
Embryo
Cell type
0-12h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
E0-12h
developmental stage
E0-12h
fraction
ChIP
antibody name
Sin3A
manufacturer
Ross Cagan/Proteintech

Sequenced DNA Library

library_name
GSM569791: Sin3A_ChIPSeq_1 and 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
17878115
Reads aligned (%)
76.7
Duplicates removed (%)
21.0
Number of peaks
4108 (qval < 1E-05)

dm6

Number of total reads
17878115
Reads aligned (%)
74.9
Duplicates removed (%)
22.6
Number of peaks
4121 (qval < 1E-05)

Base call quality data from DBCLS SRA