SRX022849
GSM559792: Input MT 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myotubes
origin
C2C12 cell line
genetic background
C3H
cell type
myotube
chip antibody
none

Sequenced DNA Library

library_name
GSM559792: Input MT 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
5541688
Reads aligned (%)
93.1
Duplicates removed (%)
8.6
Number of peaks
253 (qval < 1E-05)

mm9

Number of total reads
5541688
Reads aligned (%)
92.9
Duplicates removed (%)
9.0
Number of peaks
298 (qval < 1E-05)

Base call quality data from DBCLS SRA