Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AGO2

Cell type

Cell type Class
Cell line
Cell type
S3
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S3 cells
cell line
S3 cell line
chip antibody
anti-AGO2 mAb 9D6

Sequenced DNA Library

library_name
GSM561055: AGO2_S3_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

dm3

Number of total reads
9739953
Reads aligned (%)
90.0
Duplicates removed (%)
10.8
Number of peaks
8153 (qval < 1E-05)

dm6

Number of total reads
9739953
Reads aligned (%)
89.9
Duplicates removed (%)
12.4
Number of peaks
7377 (qval < 1E-05)

Base call quality data from DBCLS SRA