SRX022744
GSM561054: S2 input DNA

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
cell line
S2 cell line
chip antibody
none

Sequenced DNA Library

library_name
GSM561054: S2_input_DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
9292856
Reads aligned (%)
95.1
Duplicates removed (%)
7.8
Number of peaks
1708 (qval < 1E-05)

dm3

Number of total reads
9292856
Reads aligned (%)
95.4
Duplicates removed (%)
5.6
Number of peaks
2752 (qval < 1E-05)

Base call quality data from DBCLS SRA