SRX022577
GSM353651: tissue AR

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
Prostate cancer cells
NA
NA

Attributes by original data submitter

Sample

source_name
tissue - metastatic prostate cancer tissue - Chromatin IP against AR

Sequenced DNA Library

library_name
GSM353651: tissue_AR
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28236655
Reads aligned (%)
67.2
Duplicates removed (%)
18.4
Number of peaks
1753 (qval < 1E-05)

hg19

Number of total reads
28236655
Reads aligned (%)
66.4
Duplicates removed (%)
19.7
Number of peaks
1747 (qval < 1E-05)

Base call quality data from DBCLS SRA