Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERG

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
RWPE - GUS control stable cell line - Chromatin IP against ERG

Sequenced DNA Library

library_name
GSM353650: RWPE+GUS_ERG_jy16
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
11184830
Reads aligned (%)
24.6
Duplicates removed (%)
3.5
Number of peaks
75 (qval < 1E-05)

hg38

Number of total reads
11184830
Reads aligned (%)
24.8
Duplicates removed (%)
3.3
Number of peaks
73 (qval < 1E-05)

Base call quality data from DBCLS SRA