Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERG

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
RWPE - ERG overexpression stable cell lline - Chromatin IP against ERG

Sequenced DNA Library

library_name
GSM353649: RWPE+ERG_ERG_jy15
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
11783484
Reads aligned (%)
30.6
Duplicates removed (%)
2.9
Number of peaks
1416 (qval < 1E-05)

hg19

Number of total reads
11783484
Reads aligned (%)
30.4
Duplicates removed (%)
3.2
Number of peaks
1438 (qval < 1E-05)

Base call quality data from DBCLS SRA