Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
LNCAP
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
LNCaP - R1881 - Chromatin IP against AR

Sequenced DNA Library

library_name
GSM353644: LNCaP_R1881_AR_jy10
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
23722841
Reads aligned (%)
17.3
Duplicates removed (%)
13.6
Number of peaks
25708 (qval < 1E-05)

hg38

Number of total reads
23722841
Reads aligned (%)
17.5
Duplicates removed (%)
13.5
Number of peaks
24981 (qval < 1E-05)

Base call quality data from DBCLS SRA