Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
22Rv1
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
22RV1 - no treat - Chromatin IP against AR

Sequenced DNA Library

library_name
GSM353640: 22RV1_no_treat_AR
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
6925836
Reads aligned (%)
48.3
Duplicates removed (%)
11.6
Number of peaks
47 (qval < 1E-05)

hg38

Number of total reads
6925836
Reads aligned (%)
49.1
Duplicates removed (%)
11.0
Number of peaks
55 (qval < 1E-05)

Base call quality data from DBCLS SRA