SRX020700
DM embyro Stage 14 Digital DNase DS9478 replicate 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
DNase-seq
Antigen
DNase-Seq

Cell type

Cell type Class
No description
Cell type
NA
NA
NA

Attributes by original data submitter

Sample

Sequenced DNA Library

library_name
DS9478_14_2
library_strategy
DNase-Hypersensitivity
library_source
GENOMIC
library_selection
DNase

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
34350233
Reads aligned (%)
43.2
Duplicates removed (%)
25.2
Number of peaks
9569 (qval < 1E-05)

dm3

Number of total reads
34350233
Reads aligned (%)
44.2
Duplicates removed (%)
20.1
Number of peaks
10948 (qval < 1E-05)

Base call quality data from DBCLS SRA